Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7201

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7200: 15568 - K14816 REI1 pre-60S factor REI1, at 1109776 to 1111554 15568 mRNA_7201: 15569 - K10967 KTR1_3 alpha 1,2-mannosyltransferase, at 1111726 to 1113474 15569

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,111,028 + 15568 mRNA_7200 0.70 -0.2
1,111,164 - 15568 mRNA_7200 0.78 -0.6
1,111,164 + 15568 mRNA_7200 0.78 -0.8
1,111,173 + 15568 mRNA_7200 0.79 0.9
1,111,456 - 1.0
1,111,603 - -0.4
1,111,607 + 0.1
1,111,762 + 0.2
1,111,900 - 1.9
1,111,928 - 15569 mRNA_7201 0.12 -0.9
1,112,234 + 15569 mRNA_7201 0.29 0.3
1,112,600 - 15569 mRNA_7201 0.50 0.0
1,112,723 - 15569 mRNA_7201 0.57 0.0
1,113,459 + -0.1
1,113,746 - -1.0
1,113,763 - -0.5
1,113,765 - -0.0
1,113,893 + -0.2
1,113,898 - 0.2
1,113,911 + -0.7
1,114,039 + -0.1
1,114,201 + 1.8
1,114,210 + 2.0