Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7197

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7196: 15564 - KOG3329 RAN guanine nucleotide release factor, at 1104031 to 1104798 15564 mRNA_7197: 15565 - KOG0490 Transcription factor, contains HOX domain, at 1105306 to 1105458 15565

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,104,817 - -0.4
1,104,847 + -0.6
1,104,866 - 0.6
1,104,880 - 1.2
1,104,904 - 0.8
1,105,009 + -1.6
1,105,045 + 0.2
1,105,053 + -1.2
1,105,175 + -0.8
1,105,181 + 0.0
1,105,361 - 15565 mRNA_7197 0.36 1.0
1,105,382 - 15565 mRNA_7197 0.50 0.8
1,105,447 - -0.9
1,105,532 + 2.2
1,105,642 + 0.2
1,105,964 + -0.7
1,106,247 + -1.3