Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7127

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7126: 15494 - K15122 SLC41A solute carrier family 41, at 939569 to 941230 15494 mRNA_7127: 15495 - BLAST adenylate cyclase-associated protein [Moesziomyces an..., at 941404 to 943862 15495 mRNA_7128: 15496 - K00939 adk, AK adenylate kinase, at 944172 to 945488 15496

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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940,741 - 15494 mRNA_7126 0.71 -0.4
940,877 - 15494 mRNA_7126 0.79 -2.9
940,891 - 15494 mRNA_7126 0.80 -1.3
941,014 - 15494 mRNA_7126 0.87 1.0
941,309 - -1.0
941,327 + -0.0
941,328 + -0.9
941,332 - -0.7
941,460 + 1.7
941,460 + 1.7
941,590 + 1.2
941,595 - -0.9
941,602 - -0.2
941,603 + -0.7
941,612 + -3.1
941,729 - 15495 mRNA_7127 0.13 0.2
941,736 + 15495 mRNA_7127 0.14 0.1
941,766 - 15495 mRNA_7127 0.15 2.0
941,772 + 15495 mRNA_7127 0.15 1.6
941,775 + 15495 mRNA_7127 0.15 -0.6
942,035 + 15495 mRNA_7127 0.26 -1.2
942,049 - 15495 mRNA_7127 0.26 -1.1
942,105 - 15495 mRNA_7127 0.29 -1.5
942,179 - 15495 mRNA_7127 0.32 0.0
942,187 - 15495 mRNA_7127 0.32 0.4
942,660 - 15495 mRNA_7127 0.51 0.4
942,932 - 15495 mRNA_7127 0.62 -2.0
943,045 - 15495 mRNA_7127 0.67 -1.8
943,518 - 15495 mRNA_7127 0.86 -0.8
944,148 + 1.5