Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7106

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7105: 15473 - KOG1890 Phosphoinositide phosphatase SAC1, at 892209 to 895612 15473 mRNA_7106: 15474 - K11313 SUPT3H, SPT3 transcription initiation protein SPT3, at 895700 to 897201 15474 mRNA_7107: 15475 - KOG2950 Uncharacterized protein involved in protein-protein interaction, contains polyproline-binding GYF domain, at 897416 to 899091 15475

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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894,977 + 15473 mRNA_7105 0.81 2.0
895,002 - 15473 mRNA_7105 0.82 -1.7
895,399 - 0.1
895,417 - -1.1
896,016 + 15474 mRNA_7106 0.21 -0.7
896,481 - 15474 mRNA_7106 0.52 1.4
896,628 - 15474 mRNA_7106 0.62 -0.2
897,104 + -0.1
897,359 - 0.2
897,367 + -0.3
897,376 + 0.0
897,398 - -0.9
897,496 - -0.0
897,641 - 15475 mRNA_7107 0.13 -0.6
897,921 - 15475 mRNA_7107 0.30 -1.2