Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7090

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7089: 15457 - Hypothetical Protein, at 857242 to 857760 15457 mRNA_7090: 15458 - Hypothetical Protein, at 857959 to 859367 15458 mRNA_7091: 15459 - ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 859673 to 862971 15459

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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856,960 + 0.4
857,098 + -1.7
857,523 - 15457 mRNA_7089 0.54 0.9
857,838 + 0.7
857,840 - -0.1
858,154 - 15458 mRNA_7090 0.14 -1.9
858,555 - 15458 mRNA_7090 0.42 1.4
858,866 - 15458 mRNA_7090 0.64 0.2
859,728 - 0.3
859,861 + -1.2
859,871 - -0.4
859,889 + -0.1
859,889 - -0.2
859,897 + -0.5
859,897 + -1.9
860,041 + 15459 mRNA_7091 0.11 1.4
860,062 - 15459 mRNA_7091 0.12 -1.0
860,062 + 15459 mRNA_7091 0.12 -1.6
860,070 + 15459 mRNA_7091 0.12 0.1
860,073 - 15459 mRNA_7091 0.12 0.2
860,077 + 15459 mRNA_7091 0.12 -0.5
860,077 + 15459 mRNA_7091 0.12 -0.4
860,191 - 15459 mRNA_7091 0.16 -1.7
860,206 + 15459 mRNA_7091 0.16 -0.8
860,216 - 15459 mRNA_7091 0.16 0.2
860,224 + 15459 mRNA_7091 0.17 -0.2