Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7065

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7064: 15432 - K12778 HOP1 meiosis-specific protein HOP1, at 795921 to 797535 15432 mRNA_7065: 15433 - K03469 rnhA, RNASEH1 ribonuclease HI, at 797694 to 798933 15433 mRNA_7066: 15434 - K00799 GST, gst glutathione S-transferase, at 799211 to 800128 15434

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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796,718 + 15432 mRNA_7064 0.49 -0.1
796,887 + 15432 mRNA_7064 0.60 1.6
797,161 + 15432 mRNA_7064 0.77 -1.3
797,274 + 15432 mRNA_7064 0.84 0.2
797,311 + 15432 mRNA_7064 0.86 0.7
797,425 - -1.6
797,597 + 1.0
797,603 + -0.2
797,608 + 1.9
797,616 - 0.4
797,621 - -1.1
797,745 + -1.2
797,892 + 15433 mRNA_7065 0.16 -0.8
797,898 + 15433 mRNA_7065 0.16 -1.5
798,068 - 15433 mRNA_7065 0.30 -1.6
798,220 - 15433 mRNA_7065 0.42 -1.0
798,325 - 15433 mRNA_7065 0.51 0.0
798,470 + 15433 mRNA_7065 0.63 0.5
798,855 + -3.4
799,632 - 15434 mRNA_7066 0.46 -0.7
799,794 + 15434 mRNA_7066 0.64 -1.1
799,891 - 15434 mRNA_7066 0.74 -0.1