Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7058

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7057: 15425 - K15634 gpmB probable phosphoglycerate mutase, at 777852 to 778935 15425 mRNA_7058: 15426 - KOG0206 P-type ATPase, at 779457 to 784844 15426 mRNA_7059: 15427 - BLAST golgi apparatus membrane protein [Pochonia chlamy..., at 785063 to 786823 15427

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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778,634 - 15425 mRNA_7057 0.72 -0.6
778,825 - 15425 mRNA_7057 0.90 0.5
778,862 + -0.3
778,945 + 3.4
778,965 + -0.1
779,069 - 0.9
779,078 + 0.2
779,089 - -2.1
779,090 - -0.8
779,095 + -0.4
779,110 + 0.9
779,117 - -2.5
779,213 - 2.1
779,219 + -1.3
779,224 + 0.2
779,243 + 1.5
779,252 - -0.1
779,253 + -1.5
779,255 - 1.7
779,256 + 0.1
779,257 + 1.2
779,257 - 0.3
779,305 - -0.5
779,406 + -0.0
779,408 - 0.6
779,432 - 0.2
779,441 + -2.0
779,578 - -1.9
779,851 - 0.4
779,986 - 1.9
780,169 + 15426 mRNA_7058 0.13 1.2
780,551 - 15426 mRNA_7058 0.20 0.7
780,552 + 15426 mRNA_7058 0.20 0.4
780,709 + 15426 mRNA_7058 0.23 1.7
780,751 + 15426 mRNA_7058 0.24 0.5
780,888 - 15426 mRNA_7058 0.27 0.6
781,215 + 15426 mRNA_7058 0.33 -0.0
781,510 - 15426 mRNA_7058 0.38 -1.0
781,592 - 15426 mRNA_7058 0.40 0.7
781,984 - 15426 mRNA_7058 0.47 2.0
782,589 + 15426 mRNA_7058 0.58 0.5
782,919 - 15426 mRNA_7058 0.64 0.3
782,922 + 15426 mRNA_7058 0.64 -0.4
782,943 - 15426 mRNA_7058 0.65 -0.2
783,328 + 15426 mRNA_7058 0.72 0.2
783,772 - 15426 mRNA_7058 0.80 2.4
783,824 + 15426 mRNA_7058 0.81 0.5
783,863 - 15426 mRNA_7058 0.82 0.3
783,888 + 15426 mRNA_7058 0.82 1.7
784,083 - 15426 mRNA_7058 0.86 -0.4
784,251 + 15426 mRNA_7058 0.89 0.0
784,452 - 0.2
784,703 + 0.3
784,789 - 1.7
784,798 - -0.0
784,822 - -0.3
785,100 - 0.1
785,275 + 15427 mRNA_7059 0.12 -0.5
785,377 - 15427 mRNA_7059 0.18 1.6
785,527 - 15427 mRNA_7059 0.26 0.4