Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7057

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7056: 15424 - K01557 FAHD1 acylpyruvate hydrolase, at 776372 to 777538 15424 mRNA_7057: 15425 - K15634 gpmB probable phosphoglycerate mutase, at 777852 to 778935 15425 mRNA_7058: 15426 - KOG0206 P-type ATPase, at 779457 to 784844 15426

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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777,042 + 15424 mRNA_7056 0.57 0.0
777,050 - 15424 mRNA_7056 0.58 -2.4
777,196 + 15424 mRNA_7056 0.71 0.1
777,311 - 15424 mRNA_7056 0.80 1.3
777,608 + -1.9
777,610 + 0.6
777,661 + 0.0
777,769 - 0.7
777,795 + 0.9
777,889 - -0.2
777,918 - -1.1
777,923 + 0.2
778,028 - 15425 mRNA_7057 0.16 -0.0
778,039 - 15425 mRNA_7057 0.17 0.8
778,059 - 15425 mRNA_7057 0.19 1.5
778,068 - 15425 mRNA_7057 0.20 -0.5
778,368 - 15425 mRNA_7057 0.48 0.1
778,393 + 15425 mRNA_7057 0.50 -1.1
778,634 - 15425 mRNA_7057 0.72 -0.6
778,825 - 15425 mRNA_7057 0.90 0.5
778,862 + -0.3
778,945 + 3.4
778,965 + -0.1
779,069 - 0.9
779,078 + 0.2
779,089 - -2.1
779,090 - -0.8
779,095 + -0.4
779,110 + 0.9
779,117 - -2.5
779,213 - 2.1
779,219 + -1.3
779,224 + 0.2
779,243 + 1.5
779,252 - -0.1
779,253 + -1.5
779,255 - 1.7
779,256 + 0.1
779,257 + 1.2
779,257 - 0.3
779,305 - -0.5
779,406 + -0.0
779,408 - 0.6
779,432 - 0.2
779,441 + -2.0
779,578 - -1.9
779,851 - 0.4