Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7049

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7049: 15417 - KOG0565 Inositol polyphosphate 5-phosphatase and related proteins, at 758628 to 760981 15417 mRNA_7050: 15418 - K08678 UXS1, uxs UDP-glucuronate decarboxylase, at 761052 to 762821 15418

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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758,415 - 1.5
758,439 - 0.0
758,588 - -1.7
758,596 + -1.4
758,610 - -0.6
758,767 - -0.7
759,343 - 15417 mRNA_7049 0.30 -0.9
759,635 + 15417 mRNA_7049 0.43 -0.6
759,678 - 15417 mRNA_7049 0.45 0.1
759,919 - 15417 mRNA_7049 0.55 0.5
759,960 + 15417 mRNA_7049 0.57 0.2
760,288 + 15417 mRNA_7049 0.71 1.0
760,346 + 15417 mRNA_7049 0.73 0.1
760,476 + 15417 mRNA_7049 0.79 0.4
760,498 - 15417 mRNA_7049 0.79 -0.1
760,615 - 15417 mRNA_7049 0.84 2.1
760,766 + -0.1
760,777 - -0.1
760,803 - 0.7
761,075 - -2.6
761,688 + 15418 mRNA_7050 0.36 3.2
761,841 + 15418 mRNA_7050 0.45 0.0
761,924 + 15418 mRNA_7050 0.49 -1.4