Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7039

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7038: 15406 - K15458 SAP185_190 SIT4-associating protein SAP185/190, at 725352 to 729605 15406 mRNA_7039: 15407 - Hypothetical Protein, at 729956 to 731972 15407

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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729,371 + 0.1
729,491 + -1.2
729,500 - 0.5
729,643 - 0.8
729,702 - -2.6
729,777 + 0.8
729,784 + -0.9
729,803 + -0.0
729,803 + 1.5
729,806 + -1.4
729,809 + -0.2
729,813 + 0.5
729,815 + 0.6
729,947 + -1.1
729,976 - 2.4
730,208 - 15407 mRNA_7039 0.12 -1.6
730,510 + 15407 mRNA_7039 0.27 -0.8
730,797 - 15407 mRNA_7039 0.42 -0.9
730,813 - 15407 mRNA_7039 0.42 0.1
731,111 - 15407 mRNA_7039 0.57 1.2
731,267 - 15407 mRNA_7039 0.65 0.2
731,392 - 15407 mRNA_7039 0.71 0.5
731,700 - 15407 mRNA_7039 0.86 0.6
731,709 + 15407 mRNA_7039 0.87 -0.9
731,990 + 0.4
732,136 - -1.0
732,140 - -0.6
732,262 + -0.1
732,570 + 0.5
732,697 - -0.3
732,703 + -1.6
732,714 - 0.3
732,716 - 1.0
732,723 - -0.1
732,725 + 0.8
732,808 + 0.4