Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6989

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6988: 15356 - K00485 FMO dimethylaniline monooxygenase (N-oxide forming), at 609889 to 611754 15356 mRNA_6989: 15357 - K11836 USP5_13, UBP14 ubiquitin carboxyl-terminal hydrolase 5/13, at 611825 to 615054 15357 mRNA_6990: 15358 - K09001 anmK anhydro-N-acetylmuramic acid kinase, at 615563 to 617347 15358

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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610,863 + 15356 mRNA_6988 0.52 -0.4
610,886 + 15356 mRNA_6988 0.53 0.6
611,440 - 15356 mRNA_6988 0.83 -0.1
611,583 + 0.3
611,759 - -2.0
612,011 - -1.2
612,030 - 2.8
612,034 + -0.3
612,644 - 15357 mRNA_6989 0.25 0.8
613,187 - 15357 mRNA_6989 0.42 0.4
613,348 + 15357 mRNA_6989 0.47 0.8
613,519 + 15357 mRNA_6989 0.52 -0.3
613,943 + 15357 mRNA_6989 0.66 1.3
614,099 - 15357 mRNA_6989 0.70 0.6
614,997 + 2.2
615,102 + -1.1
615,445 - 2.0
615,562 - 1.4
615,655 + -0.1
615,807 - 15358 mRNA_6990 0.14 -1.6
615,961 - 15358 mRNA_6990 0.22 0.6
615,975 + 15358 mRNA_6990 0.23 2.1