Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6948

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6948: 15316 - BLAST putative ephrin type-a receptor 8-like protein [Botry..., at 505314 to 506461 15316 mRNA_6949: 15317 - HMMPfam-Cenp-O kinetochore centromere component-PF09496, at 506847 to 507636 15317

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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504,343 - 0.2
504,348 + 0.2
504,423 + 1.3
504,482 + 2.8
504,483 + 0.5
504,486 - -2.8
504,486 - -1.0
504,582 + 0.2
504,630 + 0.3
504,698 - -1.6
504,772 + 0.9
504,775 + 0.1
504,798 + -1.3
504,799 + -0.9
504,799 + -0.8
504,799 + -0.9
504,906 - -1.5
505,082 - -0.4
505,086 + 0.2
505,087 - 0.0
505,097 - -2.5
505,103 + -1.5
505,227 - -0.0
505,381 + -0.2
505,664 - 15316 mRNA_6948 0.30 -1.5
505,678 + 15316 mRNA_6948 0.32 1.4
505,687 - 15316 mRNA_6948 0.32 1.1
505,829 - 15316 mRNA_6948 0.45 0.6
506,113 + 15316 mRNA_6948 0.70 -0.7
506,114 + 15316 mRNA_6948 0.70 1.3
506,400 + -0.3
506,408 + -1.3
506,415 - 1.2
506,426 + -2.0
506,539 + -0.5
506,539 - -0.4
506,549 - -0.6
506,560 - 0.4
506,568 - 0.8
506,570 + 1.0
506,575 + -1.5
506,575 + 0.1
506,582 - 1.2
506,588 + -3.3
506,652 - -0.3
506,655 + 0.3
506,672 - 0.1
506,679 + 0.3
506,695 + -0.3
506,713 - -0.1
506,849 + -0.8
506,970 + 15317 mRNA_6949 0.16 -0.2
506,980 - 15317 mRNA_6949 0.17 0.7
506,987 - 15317 mRNA_6949 0.18 2.1