Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6938

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6937: 15305 - K03781 katE, CAT, catB, srpA catalase, at 476107 to 478851 15305 mRNA_6938: 15306 - SUPERFAMILY--SSF56801, at 478965 to 480801 15306 mRNA_6939: 15307 - K17973 NAA25, MDM20 N-terminal acetyltransferase B complex non-catalytic subunit, at 480977 to 484798 15307

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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478,050 - 15305 mRNA_6937 0.71 2.1
478,137 + 15305 mRNA_6937 0.74 0.3
478,172 + 15305 mRNA_6937 0.75 0.8
478,337 + 15305 mRNA_6937 0.81 0.1
478,482 + 15305 mRNA_6937 0.87 -1.1
478,580 - -0.2
478,930 - 0.3
479,067 - 1.1
480,128 + 15306 mRNA_6938 0.63 -0.0
480,587 + 15306 mRNA_6938 0.88 -0.6
480,694 - -1.5
480,728 + 2.1
480,868 + 0.5
480,872 + -0.2
480,875 + 1.4
480,880 + -0.6
481,155 + -0.7
481,156 - -0.2
481,177 - -1.1
481,219 - 2.0
481,326 + 0.6