Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6934

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6933: 15301 - KOG0810 SNARE protein Syntaxin 1 and related proteins, at 467075 to 468286 15301 mRNA_6934: 15302 - K12871 CCDC12 coiled-coil domain-containing protein 12, at 468467 to 469312 15302 mRNA_6935: 15303 - K12830 SF3B3, SAP130, RSE1 splicing factor 3B subunit 3, at 469424 to 473834 15303

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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467,518 + 15301 mRNA_6933 0.37 -1.9
467,620 - 15301 mRNA_6933 0.45 0.6
467,630 + 15301 mRNA_6933 0.46 0.4
467,743 - 15301 mRNA_6933 0.55 -0.6
468,025 - 15301 mRNA_6933 0.78 -1.9
468,352 - 1.5
468,454 - 0.6
468,591 - 15302 mRNA_6934 0.15 -0.2
469,209 + 15302 mRNA_6934 0.88 2.3
469,307 - 0.3
469,334 - 0.3
469,349 + -1.1
469,366 - 0.8