Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6922

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6921: 15289 - Hypothetical Protein, at 435209 to 436044 15289 mRNA_6922: 15290 - KOG4121 Nuclear pore complex, Nup133 component (sc Nup133), at 436165 to 438557 15290 mRNA_6923: 15291 - Hypothetical Protein, at 439430 to 443984 15291

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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435,277 + -0.6
435,296 + 15289 mRNA_6921 0.10 -0.4
435,316 - 15289 mRNA_6921 0.13 -0.7
435,333 - 15289 mRNA_6921 0.15 -0.2
435,370 - 15289 mRNA_6921 0.19 -0.3
435,527 + 15289 mRNA_6921 0.38 -1.6
435,567 - 15289 mRNA_6921 0.43 -0.0
435,568 - 15289 mRNA_6921 0.43 -0.3
435,733 + 15289 mRNA_6921 0.63 2.4
435,756 + 15289 mRNA_6921 0.65 -1.3
435,847 + 15289 mRNA_6921 0.76 -0.3
435,853 + 15289 mRNA_6921 0.77 -0.1
435,876 + 15289 mRNA_6921 0.80 0.4
435,884 - 15289 mRNA_6921 0.81 -0.8
435,886 + 15289 mRNA_6921 0.81 0.5
435,953 - 15289 mRNA_6921 0.89 -0.4
435,997 + -0.0
436,033 + -2.1
436,041 - 0.7
436,041 + -0.6
436,069 + -0.5
436,072 - 1.3
436,091 - -1.0
436,094 + -1.0
436,114 + -0.2
436,180 + 0.2
436,320 - -1.4
436,472 + 15290 mRNA_6922 0.13 -0.8
437,472 + 15290 mRNA_6922 0.55 2.2
437,527 + 15290 mRNA_6922 0.57 -0.0
437,622 + 15290 mRNA_6922 0.61 -1.7
437,623 + 15290 mRNA_6922 0.61 -0.4
437,628 + 15290 mRNA_6922 0.61 -1.0
438,194 - 15290 mRNA_6922 0.85 0.1
438,341 - -0.3
438,627 - 2.1
438,782 - -0.7
438,813 + 0.6
439,209 + 1.2
439,432 - 3.6