Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6900

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6899: 15267 - K01130 E3.1.6.1, aslA arylsulfatase, at 385070 to 387138 15267 mRNA_6900: 15268 - KOG0254 Predicted transporter (major facilitator superfamily), at 387700 to 389910 15268 mRNA_6901: 15269 - HMMPfam-DASH complex subunit Dad2-PF08654, at 390201 to 390814 15269

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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386,738 + 15267 mRNA_6899 0.81 -3.3
387,089 + -1.7
387,178 - 0.3
387,185 - -0.4
387,199 - -0.1
387,235 + -1.0
387,247 + -1.3
387,248 + -0.5
387,248 - -0.4
387,254 - -0.0
387,260 - 0.6
387,262 - 1.7
387,264 - 1.2
387,264 - 0.4
387,272 + -1.6
387,281 + -0.8
387,291 - 0.4
387,301 - 0.8
387,306 + -1.0
387,309 - -0.1
387,309 - 1.3
387,309 + -1.4
387,314 + 1.2
387,341 - -1.6
387,353 - 0.6
387,361 + -0.5
387,466 - 0.5
387,516 + 2.4
387,517 + -1.9
387,517 + -0.1
387,528 - 0.8
387,541 + 0.7
387,566 - 0.9
387,751 - 2.0
387,830 + 1.1
387,936 - 15268 mRNA_6900 0.11 0.5
387,951 + 15268 mRNA_6900 0.11 -1.0
388,142 - 15268 mRNA_6900 0.20 -0.9
388,382 - 15268 mRNA_6900 0.31 -1.3
388,424 - 15268 mRNA_6900 0.33 -1.2
388,853 + 15268 mRNA_6900 0.52 0.2
389,274 + 15268 mRNA_6900 0.71 -0.1
389,583 + 15268 mRNA_6900 0.85 0.2
390,042 - -0.0
390,132 - 0.3
390,446 - 15269 mRNA_6901 0.40 -2.0
390,898 + 1.1