Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6858

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6857: 15225 - Hypothetical Protein, at 292496 to 294098 15225 mRNA_6858: 15226 - SUPERFAMILY--SSF103473, at 295033 to 296248 15226 mRNA_6859: 15227 - K16794 PAFAH1B1, LIS1 platelet-activating factor acetylhydrolase IB subunit alpha, at 297202 to 298993 15227

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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294,097 - 0.4
294,166 + -2.3
294,374 + -0.4
294,742 + -0.3
294,850 + -0.8
294,888 - 0.9
294,894 + 0.5
294,919 + -0.5
295,088 + -0.9
295,120 - -0.2
295,267 - 15226 mRNA_6858 0.19 0.7
295,299 + 15226 mRNA_6858 0.22 -0.4
295,403 - 15226 mRNA_6858 0.30 -0.1
295,556 - 15226 mRNA_6858 0.43 -1.4
295,588 + 15226 mRNA_6858 0.46 1.4
296,427 - 0.0
296,428 - -0.5
296,432 + 0.2
296,561 - -0.3
296,687 - 1.1
296,829 - -1.2
296,855 - -0.7
296,870 - -0.5
296,881 - 0.1
296,889 - 0.4
296,889 + 1.7
296,889 + 3.1
296,891 - 0.9
296,898 + -1.0
297,034 - 2.4