Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6835

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6834: 15202 - KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family, at 233665 to 235762 15202 mRNA_6835: 15203 - Hypothetical Protein, at 236231 to 236767 15203

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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235,482 - 15202 mRNA_6834 0.87 -1.3
235,496 - 15202 mRNA_6834 0.87 0.7
235,612 - -0.0
235,793 - -0.0
236,026 + 0.3
236,086 + -1.1
236,202 + 0.7
236,224 - 0.4
236,267 + -0.1
236,397 - 15203 mRNA_6835 0.31 -1.4
236,526 - 15203 mRNA_6835 0.55 -0.7
236,604 + 15203 mRNA_6835 0.69 -0.9
236,621 + 15203 mRNA_6835 0.73 -0.7
236,621 + 15203 mRNA_6835 0.73 0.4
236,629 + 15203 mRNA_6835 0.74 -0.6
236,636 + 15203 mRNA_6835 0.75 -2.1
236,687 - 15203 mRNA_6835 0.85 -1.9
236,694 + 15203 mRNA_6835 0.86 1.1
236,710 - 15203 mRNA_6835 0.89 -0.6
236,789 - -0.3
236,811 - 0.8
236,813 + -1.4
236,817 - 0.1
236,818 + -1.1
236,823 - 0.2
236,824 - 0.7
236,825 - -0.8
236,829 - 0.1
236,831 + -2.1
236,836 - 0.5
236,836 - -1.2
236,836 - -0.4
236,840 + -0.3
236,840 + 0.3
236,858 - -0.4
236,991 + -0.6
237,010 + 0.8
237,025 - -0.3
237,027 - -2.4
237,055 - -1.5
237,064 - 0.2
237,109 + 0.8
237,145 - -0.5
237,145 - -0.6
237,154 + 0.4
237,159 + -0.2
237,262 + -1.1
237,266 + -1.7
237,274 + -0.5
237,274 + -0.6
237,278 + 0.0
237,292 + 0.8
237,299 - -0.8
237,325 - -1.4
237,333 - -0.1
237,361 + -0.2
237,366 + 0.1
237,377 + 0.5
237,378 + -1.4
237,378 + 2.1
237,384 + 0.3
237,415 - 0.1
237,428 + -0.3
237,475 + 0.3
237,519 - -2.4
237,519 - 1.0
237,521 - -0.0
237,526 + 0.6
237,531 + -0.0
237,533 - -0.5
237,533 - -0.4
237,541 + 1.8
237,541 + 1.3
237,541 + -2.7
237,541 + -1.1
237,545 - -1.1
237,557 - -0.6
237,563 + 0.6
237,571 - 0.8
237,571 - 1.2