Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6799

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6799: 15167 - K00033 PGD, gnd, gntZ 6-phosphogluconate dehydrogenase, at 163328 to 165722 15167 mRNA_6800: 15168 - K04709 LAG1 Acyl-CoA-dependent ceramide synthase, at 165891 to 167581 15168

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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162,373 + 0.1
162,379 - -2.3
162,390 + -0.5
162,834 - 0.5
162,982 - -1.3
163,131 + -0.6
164,246 - 15167 mRNA_6799 0.38 -2.2
165,778 + -0.1
165,791 - -0.9
165,791 - -0.1
165,812 - 1.4
165,824 - -0.4
165,825 - 1.8
165,825 - -2.7
165,828 + 0.6
165,910 - 1.5
166,306 + 15168 mRNA_6800 0.25 0.5
166,574 - 15168 mRNA_6800 0.40 -0.1
166,583 + 15168 mRNA_6800 0.41 -0.7