Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6677

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6676: 15044 - KOG3138 Predicted N-acetyltransferase, at 1419972 to 1420806 15044 mRNA_6677: 15045 - Hypothetical Protein, at 1421176 to 1421967 15045 mRNA_6678: 15046 - KOG2533 Permease of the major facilitator superfamily, at 1422360 to 1424349 15046

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,420,699 + 15044 mRNA_6676 0.87 0.1
1,420,750 - -1.5
1,420,760 - -3.2
1,420,809 - -0.4
1,420,813 + -0.5
1,420,849 + 0.3
1,420,870 - -0.8
1,420,893 - -1.8
1,420,893 + -1.8
1,420,912 + -0.4
1,420,964 + 0.1
1,420,966 - 0.7
1,420,977 + -0.8
1,420,999 - -0.2
1,421,000 - -0.1
1,421,006 + 0.6
1,421,007 + 2.3
1,421,011 + -0.0
1,421,015 - 0.6
1,421,020 - -0.2
1,421,023 + 0.0
1,421,024 + -0.6
1,421,032 + -1.0
1,421,038 - -1.0
1,421,174 + -1.3
1,421,185 + 0.9
1,421,189 + -2.9
1,421,207 + 0.7
1,421,294 - 15045 mRNA_6677 0.15 -1.4
1,421,331 - 15045 mRNA_6677 0.20 0.4
1,421,601 + 15045 mRNA_6677 0.54 -1.8
1,421,820 + 15045 mRNA_6677 0.81 0.2
1,422,164 - -1.9
1,422,287 + 0.8
1,422,749 - 15046 mRNA_6678 0.20 -0.7
1,422,762 + 15046 mRNA_6678 0.20 -2.2