Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6626

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6625: 14993 - KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins, at 1275410 to 1278515 14993 mRNA_6626: 14994 - Hypothetical Protein, at 1278893 to 1279645 14994 mRNA_6627: 14995 - KOG1114 Tripeptidyl peptidase II, at 1280374 to 1283965 14995

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,278,421 - -0.1
1,278,422 + 1.5
1,278,427 - 0.4
1,278,524 + -2.1
1,278,524 + -1.0
1,278,524 + -0.6
1,278,527 - -0.9
1,278,537 + 2.1
1,278,551 + 2.4
1,278,554 + -0.0
1,278,556 - 0.8
1,278,560 - 0.8
1,278,561 + -0.0
1,278,565 + 0.1
1,278,573 - -0.0
1,278,576 - 1.6
1,278,775 + -1.3
1,278,923 - -0.8
1,278,937 + 1.1
1,279,253 - 14994 mRNA_6626 0.48 -0.4
1,279,254 + 14994 mRNA_6626 0.48 -1.7
1,279,324 + 14994 mRNA_6626 0.57 3.5
1,279,374 - 14994 mRNA_6626 0.64 -0.7
1,279,451 + 14994 mRNA_6626 0.74 0.0
1,279,726 + 0.2
1,279,758 + 1.0
1,279,761 + 0.2
1,279,788 - 0.7
1,279,833 + 0.0
1,279,851 - 0.3
1,279,860 + -0.6
1,279,862 + -1.1
1,279,968 - 1.0
1,279,969 + 1.7
1,280,064 + 1.0
1,280,068 - 0.3
1,280,079 + -0.6
1,280,097 + -1.3
1,280,097 + -2.6
1,280,106 + -0.7
1,280,119 + 0.1
1,280,131 - 1.1
1,280,145 + -1.7
1,280,147 + -0.3