Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6565

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6564: 14932 - Hypothetical Protein, at 1108658 to 1110083 14932 mRNA_6565: 14933 - SUPERFAMILY--SSF52777, at 1110115 to 1112208 14933 mRNA_6566: 14934 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 1112309 to 1113884 14934

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,109,747 - 14932 mRNA_6564 0.76 0.1
1,109,771 - 14932 mRNA_6564 0.78 -0.3
1,109,779 + 14932 mRNA_6564 0.79 -0.5
1,109,780 + 14932 mRNA_6564 0.79 -1.6
1,110,031 - 1.3
1,110,348 - 14933 mRNA_6565 0.11 0.0
1,110,377 + 14933 mRNA_6565 0.13 1.2
1,110,768 - 14933 mRNA_6565 0.31 -0.1
1,110,937 - 14933 mRNA_6565 0.39 -0.7
1,111,054 - 14933 mRNA_6565 0.45 -1.2
1,111,508 - 14933 mRNA_6565 0.67 0.1
1,111,524 - 14933 mRNA_6565 0.67 -0.6
1,111,685 + 14933 mRNA_6565 0.75 -0.7
1,111,837 + 14933 mRNA_6565 0.82 -1.8
1,112,108 - -0.3
1,112,111 - -0.2
1,112,249 + 0.5
1,112,250 - 0.9
1,112,269 + -1.5
1,112,283 - -0.2
1,112,319 + -0.7
1,112,338 + -0.1
1,112,594 - 14934 mRNA_6566 0.18 2.6
1,112,595 + 14934 mRNA_6566 0.18 -1.0
1,112,777 + 14934 mRNA_6566 0.30 -0.1
1,112,862 + 14934 mRNA_6566 0.35 -2.6