Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6555

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6554: 14922 - K15258 PARP6_8 poly [ADP-ribose] polymerase 6/8, at 1080694 to 1084243 14922 mRNA_6555: 14923 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 1085124 to 1086396 14923 mRNA_6556: 14924 - K14793 RRP9 ribosomal RNA-processing protein 9, at 1086461 to 1088538 14924

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,084,260 + 0.4
1,084,270 - -0.6
1,084,283 - 1.5
1,084,424 - 1.5
1,084,456 + -0.5
1,084,558 - 0.8
1,084,574 - 1.6
1,084,580 + -1.0
1,084,586 - -0.5
1,084,726 - 0.2
1,084,859 - 0.5
1,084,866 - -1.1
1,084,882 + 0.2
1,084,885 + -1.1
1,084,896 + -1.1
1,085,016 + -0.2
1,085,020 + -0.6
1,085,022 + -0.8
1,085,024 + -0.6
1,085,184 - -1.3
1,085,189 - -1.1
1,085,205 - 0.3
1,085,344 - 14923 mRNA_6555 0.17 -0.9
1,085,667 - 14923 mRNA_6555 0.43 1.6
1,085,789 + 14923 mRNA_6555 0.52 0.3
1,086,212 - 14923 mRNA_6555 0.85 0.4
1,086,214 + 14923 mRNA_6555 0.86 -0.2
1,086,224 + 14923 mRNA_6555 0.86 0.5
1,086,230 - 14923 mRNA_6555 0.87 1.3
1,086,248 - 14923 mRNA_6555 0.88 1.4
1,086,378 - 0.8