Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6512

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6511: 14879 - KOG1061 Vesicle coat complex AP-1/AP-2/AP-4, beta subunit, at 957462 to 960234 14879 mRNA_6512: 14880 - KOG1089 Myotubularin-related phosphatidylinositol 3-phosphate 3-phosphatase MTM6, at 960935 to 963520 14880

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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960,103 - 1.6
960,103 - 1.6
960,103 - -0.2
960,109 + 1.7
960,185 + -1.6
960,203 - -1.4
960,204 + -0.9
960,207 - -0.9
960,217 + -0.1
960,363 - 0.1
960,525 - -1.7
960,639 + -1.3
960,663 + -2.3
960,696 + 1.2
960,791 + -0.6
960,797 - -0.5
960,825 + 1.7
960,839 + 0.3
960,942 + -0.1
961,398 - 14880 mRNA_6512 0.18 -1.0
961,739 - 14880 mRNA_6512 0.31 -0.9
961,835 - 14880 mRNA_6512 0.35 -0.8
962,115 - 14880 mRNA_6512 0.46 1.2
962,118 + 14880 mRNA_6512 0.46 -0.8
962,245 + 14880 mRNA_6512 0.51 -1.3
962,262 - 14880 mRNA_6512 0.51 1.4
962,697 + 14880 mRNA_6512 0.68 0.6
962,701 + 14880 mRNA_6512 0.68 1.8
962,867 + 14880 mRNA_6512 0.75 -3.1
963,151 + 14880 mRNA_6512 0.86 0.2
963,151 + 14880 mRNA_6512 0.86 -0.9
963,167 - 14880 mRNA_6512 0.86 -0.2
963,436 - -1.8
963,695 + 0.3
963,756 + -0.6
963,829 - 0.6
963,859 - 1.3
963,888 - -1.0
963,990 + 1.2
964,433 - -1.0
964,512 - 0.4