Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6510

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6509: 14877 - K12494 PSD PH and SEC7 domain-containing protein, at 950278 to 955327 14877 mRNA_6510: 14878 - K00818 E2.6.1.11, argD acetylornithine aminotransferase, at 955523 to 957319 14878 mRNA_6511: 14879 - KOG1061 Vesicle coat complex AP-1/AP-2/AP-4, beta subunit, at 957462 to 960234 14879

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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954,607 - 14877 mRNA_6509 0.86 -0.7
954,885 + -0.3
955,203 + -0.1
955,323 - -2.2
955,325 + -0.5
955,358 - 0.2
955,636 - -0.3
955,637 + -1.3
955,680 - -1.6
955,973 + 14878 mRNA_6510 0.25 -0.1
955,987 - 14878 mRNA_6510 0.26 -0.5
956,677 - 14878 mRNA_6510 0.64 -1.3
956,980 - 14878 mRNA_6510 0.81 -0.8
956,982 - 14878 mRNA_6510 0.81 -1.0
957,092 - 14878 mRNA_6510 0.87 -1.2
957,095 - 14878 mRNA_6510 0.87 0.5
957,116 - 14878 mRNA_6510 0.89 -0.4
957,116 + 14878 mRNA_6510 0.89 1.5
957,388 - -0.8
957,390 + -1.5
957,390 - 3.0
957,397 - 2.6
957,404 + -2.7
957,415 - 0.7
957,580 + -0.7
958,293 + 14879 mRNA_6511 0.30 0.5