Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6504

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6503: 14871 - K11360 SPT8 transcriptional activator SPT8, at 939011 to 940996 14871 mRNA_6504: 14872 - Hypothetical Protein, at 941388 to 943563 14872 mRNA_6505: 14873 - Hypothetical Protein, at 943993 to 944857 14873

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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940,409 - 14871 mRNA_6503 0.70 2.4
940,415 - 14871 mRNA_6503 0.71 -0.2
940,962 + -1.7
940,964 - -1.7
940,998 - 0.7
941,008 + -0.0
941,083 - -0.4
941,085 - -0.7
941,087 - -0.9
941,134 - -1.0
941,140 - -0.8
941,149 + 0.6
941,159 + -1.8
941,159 + -1.7
941,180 - -1.7
941,266 + -1.0
941,284 + -1.3
941,290 + 0.5
941,318 + 0.3
941,430 - -1.1
941,467 - 2.0
941,501 + 1.3
941,603 - -0.5
941,708 + 14872 mRNA_6504 0.15 0.1
941,773 + 14872 mRNA_6504 0.18 -0.9
942,095 - 14872 mRNA_6504 0.32 1.9
942,217 + 14872 mRNA_6504 0.38 -0.2
942,363 + 14872 mRNA_6504 0.45 -0.7
942,470 + 14872 mRNA_6504 0.50 1.0
942,474 - 14872 mRNA_6504 0.50 0.3
942,889 - 14872 mRNA_6504 0.69 0.2
942,896 + 14872 mRNA_6504 0.69 3.4
942,930 - 14872 mRNA_6504 0.71 -0.3
943,606 + 1.2
944,075 - 0.5
944,331 + 14873 mRNA_6505 0.39 -1.3
944,486 - 14873 mRNA_6505 0.57 1.0
944,490 - 14873 mRNA_6505 0.57 -2.7
944,511 - 14873 mRNA_6505 0.60 0.0