Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6466

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6465: 14833 - Hypothetical Protein, at 847070 to 847704 14833 mRNA_6466: 14834 - Hypothetical Protein, at 848394 to 849782 14834 mRNA_6467: 14835 - K20242 EVI5 ecotropic viral integration site 5 protein, at 850077 to 853413 14835

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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847,494 + 14833 mRNA_6465 0.67 0.6
847,494 - 14833 mRNA_6465 0.67 0.2
847,530 + 14833 mRNA_6465 0.72 -0.4
847,575 + 14833 mRNA_6465 0.80 0.2
847,634 + 14833 mRNA_6465 0.89 -2.2
847,820 + -0.3
847,867 - -0.2
847,980 + 1.2
847,993 - 0.2
848,084 + 0.6
848,110 - 2.1
848,135 + 0.4
848,136 - -0.1
848,144 + 0.1
848,271 - 0.8
848,388 - 0.7
848,416 + -0.2
848,430 + 0.6
848,556 - 14834 mRNA_6466 0.12 -0.2
848,559 - 14834 mRNA_6466 0.12 -1.1
848,650 - 14834 mRNA_6466 0.18 -1.8
848,674 - 14834 mRNA_6466 0.20 0.4
848,834 - 14834 mRNA_6466 0.32 0.2
848,871 - 14834 mRNA_6466 0.34 -0.0
848,874 + 14834 mRNA_6466 0.35 -0.3
849,270 - 14834 mRNA_6466 0.63 1.9
849,282 - 14834 mRNA_6466 0.64 0.4
849,283 + 14834 mRNA_6466 0.64 0.5
849,424 + 14834 mRNA_6466 0.74 1.1
849,550 - 14834 mRNA_6466 0.83 -0.8
849,555 - 14834 mRNA_6466 0.84 0.6
849,687 + -0.2
849,694 - 0.1
849,715 + 0.0
849,723 + -1.2
849,832 - 0.6
849,860 - -1.4
849,871 - 0.6
849,877 - 0.3
849,988 + 0.0
849,989 - 0.4
849,999 - 2.1
849,999 - 0.1
850,005 - 0.7
850,007 - 0.1
850,018 + 0.0
850,019 + 0.8
850,026 + -0.6
850,029 - 0.2
850,033 + 0.6
850,035 - -0.0
850,145 - 2.0
850,151 - -0.7
850,157 + 0.4
850,180 - -1.9
850,186 + -2.5
850,319 + -0.3
850,330 + -0.6
850,338 + 0.2
850,446 - 14835 mRNA_6467 0.11 1.7
850,599 - 14835 mRNA_6467 0.16 -1.6
850,747 - 14835 mRNA_6467 0.20 1.5