Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6450

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6449: 14817 - HMMPfam-Protein of unknown function (DUF1399)-PF07173, at 818867 to 821319 14817 mRNA_6450: 14818 - Hypothetical Protein, at 821969 to 822682 14818 mRNA_6451: 14819 - Hypothetical Protein, at 823535 to 824941 14819

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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821,069 - 14817 mRNA_6449 0.90 0.7
821,090 - 0.9
821,099 + -0.7
821,835 + 1.5
821,884 - 0.6
821,928 - 0.8
821,984 + -0.4
822,261 + 14818 mRNA_6450 0.41 2.5
822,378 + 14818 mRNA_6450 0.57 1.7
822,380 + 14818 mRNA_6450 0.58 -0.1
822,392 - 14818 mRNA_6450 0.59 3.5
822,392 - 14818 mRNA_6450 0.59 0.6
822,433 + 14818 mRNA_6450 0.65 -0.3
822,557 - 14818 mRNA_6450 0.82 0.1
822,567 + 14818 mRNA_6450 0.84 -2.8
822,570 - 14818 mRNA_6450 0.84 -1.5
822,583 + 14818 mRNA_6450 0.86 -0.9
822,601 + 14818 mRNA_6450 0.89 -0.9
822,680 - 0.4
822,689 + -0.8
822,713 - 0.2
822,718 + -0.9
822,830 - -0.7
822,975 - -0.4
823,000 - -0.5
823,292 - -0.6
823,473 + 1.0
823,589 + -0.9