Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6440

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6439: 14807 - Hypothetical Protein, at 801024 to 801752 14807 mRNA_6440: 14808 - Hypothetical Protein, at 802192 to 802893 14808 mRNA_6441: 14809 - K07200 PRKAG 5'-AMP-activated protein kinase, regulatory gamma subunit, at 803025 to 805267 14809

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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801,238 + 14807 mRNA_6439 0.29 -2.0
801,368 + 14807 mRNA_6439 0.47 -0.5
801,457 - 14807 mRNA_6439 0.59 0.5
801,520 - 14807 mRNA_6439 0.68 0.6
801,559 + 14807 mRNA_6439 0.73 -0.8
801,780 - 0.7
801,826 - -0.6
801,838 - 0.4
802,135 + -0.1
802,282 + 14808 mRNA_6440 0.13 0.6
802,556 - 14808 mRNA_6440 0.52 1.7
802,594 - 14808 mRNA_6440 0.57 -1.4
802,655 - 14808 mRNA_6440 0.66 2.2
802,696 + 14808 mRNA_6440 0.72 -0.3
802,729 - 14808 mRNA_6440 0.76 0.6
802,773 + 14808 mRNA_6440 0.83 0.1
802,844 - -0.1
802,908 + 1.8
803,674 - 14809 mRNA_6441 0.29 -1.2
803,750 - 14809 mRNA_6441 0.32 2.4