Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6436

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6435: 14803 - K01930 FPGS folylpolyglutamate synthase, at 794162 to 796213 14803 mRNA_6436: 14804 - SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045, at 796406 to 797649 14804 mRNA_6437: 14805 - K07511 ECHS1 enoyl-CoA hydratase, at 797925 to 799246 14805

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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796,225 - 0.7
796,249 - -0.3
796,257 + -1.2
796,272 + -2.0
796,325 + -0.8
796,333 - -1.0
796,334 + -0.9
796,335 + 0.6
796,342 + 1.3
796,346 + 0.9
796,504 + -0.4
796,621 - 14804 mRNA_6436 0.17 0.6
796,634 - 14804 mRNA_6436 0.18 0.0
796,648 + 14804 mRNA_6436 0.19 1.0
796,745 - 14804 mRNA_6436 0.27 0.1
796,750 - 14804 mRNA_6436 0.28 -1.6
796,769 + 14804 mRNA_6436 0.29 -0.2
796,777 + 14804 mRNA_6436 0.30 2.6
797,172 - 14804 mRNA_6436 0.62 -0.8
797,183 - 14804 mRNA_6436 0.62 2.7
797,307 - 14804 mRNA_6436 0.72 1.0
797,501 + 14804 mRNA_6436 0.88 -1.3
797,506 - 14804 mRNA_6436 0.88 0.1
797,637 - -0.0
797,787 - 0.5
797,881 - 1.7
797,971 + -1.7
798,224 + 14805 mRNA_6437 0.23 -1.0
798,226 - 14805 mRNA_6437 0.23 0.5
798,394 - 14805 mRNA_6437 0.35 -0.4
798,548 + 14805 mRNA_6437 0.47 -0.6
798,549 + 14805 mRNA_6437 0.47 -1.8
798,566 + 14805 mRNA_6437 0.48 -0.5