Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6428

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6427: 14795 - KOG0516 Dystonin, GAS (Growth-arrest-specific protein), and related proteins, at 773204 to 778326 14795 mRNA_6428: 14796 - KOG2208 Vigilin, at 779181 to 783068 14796

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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778,240 + -0.1
778,263 + -1.6
778,290 + -1.9
778,647 - 1.9
778,742 + 0.4
778,785 + -0.7
778,861 + -0.2
778,883 - -0.6
778,883 - 0.4
778,909 - 0.3
778,913 + -1.6
779,053 - -0.0
779,541 + -2.3
779,809 + 14796 mRNA_6428 0.16 1.6
780,038 + 14796 mRNA_6428 0.22 0.4
780,040 - 14796 mRNA_6428 0.22 -0.8
780,156 - 14796 mRNA_6428 0.25 -0.1
780,248 - 14796 mRNA_6428 0.27 -1.5
780,273 + 14796 mRNA_6428 0.28 -0.4
780,389 - 14796 mRNA_6428 0.31 -1.0
780,422 + 14796 mRNA_6428 0.32 0.6
780,499 - 14796 mRNA_6428 0.34 -1.3
780,654 - 14796 mRNA_6428 0.38 1.2
780,666 - 14796 mRNA_6428 0.38 1.0
780,945 - 14796 mRNA_6428 0.45 1.6
781,097 - 14796 mRNA_6428 0.49 0.9
781,104 + 14796 mRNA_6428 0.49 0.4
781,126 + 14796 mRNA_6428 0.50 1.3
781,245 + 14796 mRNA_6428 0.53 0.7
781,261 + 14796 mRNA_6428 0.53 1.3
781,261 + 14796 mRNA_6428 0.53 3.0
781,443 + 14796 mRNA_6428 0.58 2.2
781,536 + 14796 mRNA_6428 0.61 -0.6
781,548 + 14796 mRNA_6428 0.61 -0.7
781,567 - 14796 mRNA_6428 0.61 -1.4
781,573 + 14796 mRNA_6428 0.62 2.8
781,606 + 14796 mRNA_6428 0.62 -3.4
781,661 - 14796 mRNA_6428 0.64 -1.5
781,701 - 14796 mRNA_6428 0.65 -0.7
781,795 - 14796 mRNA_6428 0.67 -0.5
781,888 + 14796 mRNA_6428 0.70 2.5
782,021 - 14796 mRNA_6428 0.73 0.6
782,024 + 14796 mRNA_6428 0.73 -0.3
782,143 + 14796 mRNA_6428 0.76 -0.2
782,268 - 14796 mRNA_6428 0.79 -0.1
782,387 + 14796 mRNA_6428 0.82 0.7
782,389 - 14796 mRNA_6428 0.83 1.4
782,428 - 14796 mRNA_6428 0.84 -1.4
783,050 - 0.2
783,168 - -0.2
783,195 - 0.6
783,295 - 0.1
783,483 - -1.7
783,489 + -0.5
783,500 + 1.3
783,601 - 0.2
783,618 + -0.5
783,628 + -0.8
783,630 - -0.1
783,632 - -0.0
783,639 + -3.2
783,640 + -1.1
783,647 + 1.5
783,664 + -0.2
783,664 + -2.3
783,674 + 0.9
783,676 - 0.3
783,679 + 0.0
783,701 + 0.2
783,777 - 0.7
783,812 - -2.1
783,924 - -1.7
783,947 - 0.7
783,949 - -1.2
783,954 + 2.7
783,979 + -0.4
783,988 - -0.9
784,012 - 1.5
784,055 + -1.3