Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6396

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6395: 14763 - K19403 MCPH1 microcephalin, at 713200 to 716170 14763 mRNA_6396: 14764 - Hypothetical Protein, at 716861 to 718717 14764 mRNA_6397: 14765 - K02976 RP-S26e, RPS26 small subunit ribosomal protein S26e, at 719574 to 720317 14765

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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715,875 + 0.3
715,882 - -1.3
716,019 + -0.4
716,020 - -1.6
716,308 - 0.9
716,328 - 1.1
716,347 - 1.8
716,356 - -0.3
716,396 - 0.1
716,456 + 0.2
716,479 + -0.4
716,517 + -1.0
717,077 + 14764 mRNA_6396 0.12 -0.8
717,232 - 14764 mRNA_6396 0.20 -0.2
717,237 + 14764 mRNA_6396 0.20 2.3
717,238 - 14764 mRNA_6396 0.20 0.6
717,357 - 14764 mRNA_6396 0.27 0.1
717,371 + 14764 mRNA_6396 0.27 0.2
717,515 - 14764 mRNA_6396 0.35 0.2
717,517 + 14764 mRNA_6396 0.35 0.4
717,525 + 14764 mRNA_6396 0.36 0.2
717,532 - 14764 mRNA_6396 0.36 1.2
717,555 + 14764 mRNA_6396 0.37 0.6
717,642 - 14764 mRNA_6396 0.42 0.4
717,656 + 14764 mRNA_6396 0.43 -0.4
717,683 - 14764 mRNA_6396 0.44 -0.4
717,706 - 14764 mRNA_6396 0.46 -0.6
717,732 - 14764 mRNA_6396 0.47 -0.2
717,774 - 14764 mRNA_6396 0.49 1.6
717,793 - 14764 mRNA_6396 0.50 1.0
717,815 - 14764 mRNA_6396 0.51 0.1
717,824 + 14764 mRNA_6396 0.52 0.4
717,967 - 14764 mRNA_6396 0.60 -1.6
717,967 + 14764 mRNA_6396 0.60 -0.0
717,974 + 14764 mRNA_6396 0.60 1.0
718,008 - 14764 mRNA_6396 0.62 -1.1
718,122 - 14764 mRNA_6396 0.68 1.5
718,394 - 14764 mRNA_6396 0.83 -0.4
718,403 + 14764 mRNA_6396 0.83 -0.9
718,579 + 0.7
718,717 - -1.9
718,717 - 1.2
718,732 + 0.2
718,738 - -0.5
718,746 + 1.0
718,873 + -0.5
718,878 - 0.4
718,890 - -1.1
718,893 + -0.8
718,900 + 0.0
719,020 - 0.3
719,020 + -1.3
719,027 + 1.5