Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6395

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6394: 14762 - HMMPfam-Asparagine synthase-PF00733,SUPERFAMILY--SSF52402,SUPERFAMILY--SSF56235, at 710467 to 712891 14762 mRNA_6395: 14763 - K19403 MCPH1 microcephalin, at 713200 to 716170 14763 mRNA_6396: 14764 - Hypothetical Protein, at 716861 to 718717 14764

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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712,256 + 14762 mRNA_6394 0.74 0.8
712,460 - 14762 mRNA_6394 0.82 0.4
712,541 - 14762 mRNA_6394 0.86 0.1
712,636 - 14762 mRNA_6394 0.89 0.8
712,637 + 14762 mRNA_6394 0.89 -0.5
713,267 + 0.6
713,285 - -0.8
713,286 + 0.2
713,428 - -1.2
713,502 + 14763 mRNA_6395 0.10 -1.8
713,704 - 14763 mRNA_6395 0.17 1.6
713,704 - 14763 mRNA_6395 0.17 2.4
713,710 + 14763 mRNA_6395 0.17 -1.8
713,800 - 14763 mRNA_6395 0.20 -1.9
714,278 - 14763 mRNA_6395 0.36 -1.0
714,444 + 14763 mRNA_6395 0.42 -1.8
714,522 - 14763 mRNA_6395 0.44 -0.0
714,579 + 14763 mRNA_6395 0.46 -0.6
714,737 + 14763 mRNA_6395 0.52 -0.6
715,443 + 14763 mRNA_6395 0.75 -1.6
715,566 - 14763 mRNA_6395 0.80 0.0
715,834 - 14763 mRNA_6395 0.89 0.6
715,875 + 0.3
715,882 - -1.3
716,019 + -0.4
716,020 - -1.6
716,308 - 0.9
716,328 - 1.1
716,347 - 1.8
716,356 - -0.3
716,396 - 0.1
716,456 + 0.2
716,479 + -0.4
716,517 + -1.0
717,077 + 14764 mRNA_6396 0.12 -0.8