Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6359

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6359: 14727 - KOG1812 Predicted E3 ubiquitin ligase, at 630775 to 633081 14727 mRNA_6360: 14728 - K17790 TIM22 mitochondrial import inner membrane translocase subunit TIM22, at 633743 to 634504 14728

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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629,794 + 0.6
629,797 + 0.0
629,809 - -0.3
629,812 - -0.1
629,827 - -3.3
629,842 - 0.0
629,850 + -0.9
629,858 - -0.4
629,859 + -0.5
629,864 + -2.4
629,893 - -0.0
629,899 + 1.1
629,902 + 2.4
629,903 - -0.5
629,911 + -0.7
629,917 - -2.2
629,919 - 2.3
629,926 + -0.6
629,956 + -0.7
629,958 + 0.2
629,959 - 0.4
629,976 - 1.4
629,984 + 0.2
629,985 + -3.3
630,000 - -2.2
630,003 + 1.3
630,004 + -0.2
630,008 + -0.3
630,010 + -1.0
630,013 - 1.3
630,024 + -1.8
630,036 - -0.4
630,040 - -0.3
630,041 + -0.0
630,056 - -0.4
630,064 - -0.2
630,159 + -0.2
630,165 - 0.9
630,169 - -0.3
630,183 + -0.5
630,198 - 1.6
630,220 + 0.6
630,234 + 1.2
630,280 + -2.4
630,281 + -1.6
630,285 - -0.6
630,312 - -1.0
630,325 + -0.1
630,343 - 0.1
630,351 + -0.6
630,355 - -0.8
630,355 - 0.6
630,362 - -1.3
630,373 - -0.2
630,375 + 1.1
630,376 - 0.8
630,376 - -0.6
630,379 + 0.6
630,390 + 0.0
630,397 - 0.9
630,446 + -1.1
630,459 - 1.3
630,542 + 0.4
630,588 - 1.4
630,604 - -0.1
630,984 - 0.9
631,191 - 14727 mRNA_6359 0.18 -0.4
631,271 - 14727 mRNA_6359 0.21 0.4
631,301 - 14727 mRNA_6359 0.23 -0.4
631,310 + 14727 mRNA_6359 0.23 -0.8
631,622 + 14727 mRNA_6359 0.37 2.4
631,798 - 14727 mRNA_6359 0.44 -0.2
632,038 - 14727 mRNA_6359 0.55 0.1
632,184 + 14727 mRNA_6359 0.61 -0.7
632,207 + 14727 mRNA_6359 0.62 -0.2
632,533 - 14727 mRNA_6359 0.76 -0.1
632,673 - 14727 mRNA_6359 0.82 -2.7
632,771 - 14727 mRNA_6359 0.87 -0.6
632,903 + -0.8
632,915 - 0.0
632,951 + -0.3
633,227 - -1.4
633,239 + -1.9
633,350 + -1.2
633,352 - 0.6
633,363 - 0.1
633,368 - 2.2
633,377 + -1.1
633,508 + 0.1
633,508 - -0.8
633,682 - 1.9
633,762 - 1.5