Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6356

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6355: 14723 - KOG4532 WD40-like repeat containing protein, at 619648 to 622272 14723 mRNA_6356: 14724 - K01477 alc, ALLC allantoicase, at 622458 to 625058 14724 mRNA_6357: 14725 - HMMPfam-Ribonuclease-III-like-PF14622,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF69065, at 625367 to 626592 14725

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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621,459 + 14723 mRNA_6355 0.69 1.3
621,609 - 14723 mRNA_6355 0.75 -0.2
621,877 + 14723 mRNA_6355 0.85 3.0
622,314 - 0.8
622,329 - -3.5
622,329 - -1.5
622,340 + 2.7
622,368 + 2.1
622,369 - -1.9
622,935 - 14724 mRNA_6356 0.18 0.9
623,229 - 14724 mRNA_6356 0.30 -1.0
623,361 + 14724 mRNA_6356 0.35 0.2
623,976 - 14724 mRNA_6356 0.58 -0.4
624,372 - 14724 mRNA_6356 0.74 0.8
624,536 + 14724 mRNA_6356 0.80 0.2
624,554 + 14724 mRNA_6356 0.81 1.1
624,829 + -1.1
624,839 + 1.6
624,851 - 1.1
624,853 + 0.2
624,994 + -0.0
624,995 - 1.4
625,015 - -1.1
625,113 + 1.4
625,164 + 1.7
625,174 + -0.0
625,197 + -1.1
625,253 - 1.6
625,299 - 0.5
625,481 - -0.2