Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6302

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6301: 14669 - Hypothetical Protein, at 477097 to 477785 14669 mRNA_6302: 14670 - K12562 AMPH amphiphysin, at 478198 to 480170 14670 mRNA_6303: 14671 - HMMPfam-Uncharacterised protein family UPF0052-PF01933,SUPERFAMILY--SSF142338, at 480428 to 482328 14671

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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477,325 - 14669 mRNA_6301 0.33 0.5
477,600 - 14669 mRNA_6301 0.73 1.6
477,734 - 1.9
477,862 + 1.0
477,879 - 2.2
477,898 + -0.5
478,470 - 14670 mRNA_6302 0.14 0.2
478,887 + 14670 mRNA_6302 0.35 0.5
479,191 + 14670 mRNA_6302 0.50 0.8
479,496 + 14670 mRNA_6302 0.66 1.4
479,514 + 14670 mRNA_6302 0.67 1.1
479,626 - 14670 mRNA_6302 0.72 -0.3
480,069 - 0.2
480,071 - 0.7
480,210 + 2.1
480,230 - 1.6
480,249 + -1.5
480,255 + 0.6
480,395 + -0.2
480,676 - 14671 mRNA_6303 0.13 -0.9
480,676 - 14671 mRNA_6303 0.13 -0.9
480,682 + 14671 mRNA_6303 0.13 -1.7
480,691 - 14671 mRNA_6303 0.14 1.2
480,787 - 14671 mRNA_6303 0.19 -0.2