Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6207

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6206: 14574 - K10524 NRK1_2 nicotinamide/nicotinate riboside kinase, at 246520 to 247686 14574 mRNA_6207: 14575 - KOG2711 Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase, at 248249 to 248882 14575 mRNA_6208: 14576 - K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+), at 249566 to 251082 14576

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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247,249 - 14574 mRNA_6206 0.62 -0.6
247,733 - 0.4
247,883 - 0.2
247,886 + -2.6
247,890 + 0.0
247,919 + -0.3
247,922 - -1.9
248,176 + 0.6
248,317 - 14575 mRNA_6207 0.11 -0.9
248,344 - 14575 mRNA_6207 0.15 -0.1
248,505 + 14575 mRNA_6207 0.40 -0.8
248,814 + 14575 mRNA_6207 0.89 -2.2
249,011 - 0.7
249,075 - 0.7
249,078 - 0.5
249,082 + -0.4
249,083 + 1.2
249,195 - -0.5
249,198 + -1.0
249,211 - 0.2
249,227 - 0.5
249,245 - -1.9
249,367 - -0.4
249,368 + -0.5
249,404 - -1.2
249,428 + -0.4
249,506 + -1.4
249,515 + -0.2
249,796 + 14576 mRNA_6208 0.15 0.8