Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6205

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6204: 14572 - KOG1618 Predicted phosphatase, at 243307 to 244867 14572 mRNA_6205: 14573 - HMMPfam-Peptidase M50B-like-PF13398, at 244969 to 246074 14573 mRNA_6206: 14574 - K10524 NRK1_2 nicotinamide/nicotinate riboside kinase, at 246520 to 247686 14574

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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243,996 - 14572 mRNA_6204 0.44 0.3
244,140 + 14572 mRNA_6204 0.53 -0.2
244,383 + 14572 mRNA_6204 0.69 -0.2
244,656 - 14572 mRNA_6204 0.86 0.3
245,105 + 14573 mRNA_6205 0.12 -1.5
245,253 - 14573 mRNA_6205 0.26 -1.9
245,256 - 14573 mRNA_6205 0.26 -2.5
245,256 + 14573 mRNA_6205 0.26 0.0
245,543 - 14573 mRNA_6205 0.52 0.2
245,658 + 14573 mRNA_6205 0.62 0.1
245,969 + -0.8
246,113 - 1.6
246,122 - 0.2
246,131 - 0.3
246,279 + 0.6
246,290 + -0.3
246,297 + -1.3