Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6203

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6202: 14570 - KOG4475 FOG Immunoglobin and related proteins, at 237374 to 240451 14570 mRNA_6203: 14571 - HMMPfam-HbrB-like-PF08539, at 240769 to 243130 14571 mRNA_6204: 14572 - KOG1618 Predicted phosphatase, at 243307 to 244867 14572

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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240,174 - -0.5
240,418 - -0.0
240,617 - -1.3
240,827 - -1.1
240,993 + 2.7
241,014 + 14571 mRNA_6203 0.10 -0.4
241,036 + 14571 mRNA_6203 0.11 -0.3
241,041 + 14571 mRNA_6203 0.12 0.1
241,156 - 14571 mRNA_6203 0.16 1.7
241,167 - 14571 mRNA_6203 0.17 -0.4
241,739 - 14571 mRNA_6203 0.41 0.1
241,744 + 14571 mRNA_6203 0.41 0.8
241,876 - 14571 mRNA_6203 0.47 1.2
241,914 + 14571 mRNA_6203 0.48 0.7
242,245 + 14571 mRNA_6203 0.62 -1.0
242,920 - 0.4
243,072 - -1.4
243,082 + -1.0
243,200 + 0.3
243,232 + -0.1
243,240 + -0.1
243,242 + 0.5
243,268 + 0.1
243,394 - -0.6
243,512 + 14572 mRNA_6204 0.13 0.3
243,765 + 14572 mRNA_6204 0.29 -0.2
243,925 - 14572 mRNA_6204 0.40 0.9
243,956 + 14572 mRNA_6204 0.42 -0.5
243,996 - 14572 mRNA_6204 0.44 0.3