Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6202

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6201: 14569 - Hypothetical Protein, at 236476 to 237020 14569 mRNA_6202: 14570 - KOG4475 FOG Immunoglobin and related proteins, at 237374 to 240451 14570 mRNA_6203: 14571 - HMMPfam-HbrB-like-PF08539, at 240769 to 243130 14571

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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236,377 + -1.2
236,507 - -0.3
236,539 + 14569 mRNA_6201 0.12 1.0
236,540 - 14569 mRNA_6201 0.12 0.3
236,549 + 14569 mRNA_6201 0.13 0.5
236,561 - 14569 mRNA_6201 0.16 0.7
236,565 - 14569 mRNA_6201 0.16 0.3
236,568 + 14569 mRNA_6201 0.17 2.4
236,588 - 14569 mRNA_6201 0.21 0.7
236,637 + 14569 mRNA_6201 0.30 1.0
236,649 - 14569 mRNA_6201 0.32 0.4
236,676 + 14569 mRNA_6201 0.37 -2.3
236,683 + 14569 mRNA_6201 0.38 0.5
236,703 - 14569 mRNA_6201 0.42 -0.5
236,707 + 14569 mRNA_6201 0.42 -0.4
236,720 + 14569 mRNA_6201 0.45 1.9
236,720 + 14569 mRNA_6201 0.45 0.4
236,740 - 14569 mRNA_6201 0.48 0.5
236,813 - 14569 mRNA_6201 0.62 2.1
236,823 + 14569 mRNA_6201 0.64 -0.5
236,842 - 14569 mRNA_6201 0.67 0.1
236,848 + 14569 mRNA_6201 0.68 -0.0
236,852 + 14569 mRNA_6201 0.69 0.5
236,853 + 14569 mRNA_6201 0.69 -0.1
236,858 - 14569 mRNA_6201 0.70 -0.6
236,865 - 14569 mRNA_6201 0.71 0.3
236,866 + 14569 mRNA_6201 0.72 0.1
236,875 + 14569 mRNA_6201 0.73 -2.2
236,886 + 14569 mRNA_6201 0.75 0.2
237,000 + -0.1
237,017 + 1.2
237,024 - 0.4
237,026 + -1.3
237,026 - 2.0
237,031 + 2.2
237,303 - 1.0
237,581 - -1.5
237,602 - -1.3
237,873 + 14570 mRNA_6202 0.16 -0.0
237,918 - 14570 mRNA_6202 0.18 -0.7
238,484 + 14570 mRNA_6202 0.36 -0.5
238,767 - 14570 mRNA_6202 0.45 -0.0
238,999 + 14570 mRNA_6202 0.53 0.9
239,120 - 14570 mRNA_6202 0.57 0.5
240,174 - -0.5
240,418 - -0.0
240,617 - -1.3
240,827 - -1.1
240,993 + 2.7
241,014 + 14571 mRNA_6203 0.10 -0.4
241,036 + 14571 mRNA_6203 0.11 -0.3
241,041 + 14571 mRNA_6203 0.12 0.1
241,156 - 14571 mRNA_6203 0.16 1.7
241,167 - 14571 mRNA_6203 0.17 -0.4