Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6200

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6199: 14567 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 230911 to 232731 14567 mRNA_6200: 14568 - Hypothetical Protein, at 233137 to 235524 14568 mRNA_6201: 14569 - Hypothetical Protein, at 236476 to 237020 14569

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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232,202 - 14567 mRNA_6199 0.71 0.2
232,335 - 14567 mRNA_6199 0.78 -0.6
232,458 - 14567 mRNA_6199 0.85 -1.1
232,469 - 14567 mRNA_6199 0.86 1.7
232,478 - 14567 mRNA_6199 0.86 -0.0
232,509 - 14567 mRNA_6199 0.88 -1.3
232,514 - 14567 mRNA_6199 0.88 0.0
232,597 - -0.5
232,618 + 0.0
232,626 - 0.2
232,637 + 0.2
232,643 - -2.7
232,657 + -1.2
232,783 - -0.4
232,815 + 0.2
232,821 + 0.9
232,953 - 1.1
233,105 - 1.0
233,829 - 14568 mRNA_6200 0.29 0.6
234,007 - 14568 mRNA_6200 0.36 -1.5
234,147 - 14568 mRNA_6200 0.42 0.1
234,147 + 14568 mRNA_6200 0.42 -0.1
234,860 + 14568 mRNA_6200 0.72 0.1
235,142 + 14568 mRNA_6200 0.84 -0.5
235,142 + 14568 mRNA_6200 0.84 0.7
235,436 - -1.4
235,461 - 0.6
235,559 + -0.9
235,572 - -0.2
235,575 - -0.3
235,575 + 0.1
235,579 - 0.1
235,608 + 0.0
235,615 - -2.6
235,631 - -0.2
235,633 - -1.7
235,634 + -0.3
235,701 + -0.3
235,775 + 0.9
236,071 - -1.6
236,081 - -0.0
236,229 + -0.1
236,234 - 2.5
236,311 - 1.6
236,359 + -0.5
236,371 - 1.2
236,377 + -1.2
236,507 - -0.3