Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6155

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6154: 14522 - K16667 PTPRG receptor-type tyrosine-protein phosphatase gamma, at 133895 to 137413 14522 mRNA_6155: 14523 - Hypothetical Protein, at 137746 to 139265 14523

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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136,943 + 14522 mRNA_6154 0.87 0.1
137,001 - 14522 mRNA_6154 0.88 0.9
137,009 + 14522 mRNA_6154 0.88 0.5
137,129 + 0.3
137,269 - 0.4
137,302 - 0.4
137,364 - 0.1
137,402 + -0.9
137,531 + 0.0
137,654 + 0.6
138,325 - 14523 mRNA_6155 0.38 0.5
138,870 + 14523 mRNA_6155 0.74 -0.4
139,017 - 14523 mRNA_6155 0.84 0.3
139,033 - 14523 mRNA_6155 0.85 -0.6
139,165 - -1.7
139,173 + 2.5
139,177 - -0.1
139,183 + 0.2
139,318 - -0.2
139,322 - -1.9
139,438 - 0.6
139,625 + -0.2
139,752 - -0.5
139,781 + -2.6
139,783 - 1.0
139,805 - 0.2
140,071 + -1.1
140,168 + -2.1