Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6153

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6152: 14520 - HMMPfam-Slx4 endonuclease-PF09494, at 127167 to 130520 14520 mRNA_6153: 14521 - K00757 udp, UPP uridine phosphorylase, at 131341 to 132602 14521

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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130,854 + -1.4
130,888 - -0.1
130,889 + -1.1
131,021 + 1.1
131,152 - 2.4
131,169 + 0.6
131,575 - 14521 mRNA_6153 0.19 1.3
131,631 + 14521 mRNA_6153 0.23 0.8
131,860 - 14521 mRNA_6153 0.41 0.1
132,029 + 14521 mRNA_6153 0.55 0.7
132,148 + 14521 mRNA_6153 0.64 1.0
132,402 - 14521 mRNA_6153 0.84 0.9
132,455 + 14521 mRNA_6153 0.88 1.6
132,710 + 0.7
132,931 + 0.6
133,134 - 0.9
133,280 - 0.8
133,280 + -0.1
133,297 + -0.3
133,297 + -0.2
133,299 + 0.6
133,347 - -0.9
133,402 - -2.4
133,449 - 0.6
133,449 - 0.9
133,456 + 0.2
133,459 - 0.6
133,459 - 1.6
133,462 + -0.7
133,474 - -0.8
133,474 - 0.6
133,475 + -1.3
133,476 - 1.2
133,498 - -0.5
133,498 + -1.3
133,506 + 0.2
133,509 + 0.9
133,597 + 1.4
133,600 - -0.8