Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6145

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6144: 14512 - KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors, at 113146 to 115077 14512 mRNA_6145: 14513 - HMMPfam-Protein of unknown function (DUF2456)-PF10445, at 115513 to 116915 14513 mRNA_6146: 14514 - K02925 RP-L3e, RPL3 large subunit ribosomal protein L3e, at 117398 to 118882 14514

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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114,958 + 1.3
115,135 - -0.6
115,298 + -1.6
115,400 + -0.8
115,794 - 14513 mRNA_6145 0.20 0.5
115,922 + 14513 mRNA_6145 0.29 -0.9
116,022 - 14513 mRNA_6145 0.36 -0.7
116,079 - 14513 mRNA_6145 0.40 -1.3
116,109 - 14513 mRNA_6145 0.42 -0.5
116,127 + 14513 mRNA_6145 0.44 0.8
116,290 - 14513 mRNA_6145 0.55 -0.5
116,312 + 14513 mRNA_6145 0.57 -0.6
116,313 - 14513 mRNA_6145 0.57 1.0
116,426 + 14513 mRNA_6145 0.65 0.9
116,535 - 14513 mRNA_6145 0.73 -0.2
116,656 + 14513 mRNA_6145 0.81 0.8
116,664 - 14513 mRNA_6145 0.82 -0.5
116,699 - 14513 mRNA_6145 0.85 -2.9
116,716 - 14513 mRNA_6145 0.86 1.8
116,716 + 14513 mRNA_6145 0.86 0.0
116,755 - 14513 mRNA_6145 0.89 3.5
116,850 + 1.0
116,865 - 0.0
116,951 + 2.9
117,005 - -1.1
117,017 + 1.1
117,025 - -2.1
117,029 - 1.2
117,036 + -0.6
117,036 + -0.4
117,036 + 0.1
117,036 + 0.8
117,039 + -1.0
117,048 + -1.2
117,132 + -0.3
117,170 - -0.7
117,215 + -1.9