Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6115

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6114: 14482 - Hypothetical Protein, at 25220 to 26095 14482 mRNA_6115: 14483 - Hypothetical Protein, at 26459 to 27455 14483 mRNA_6116: 14484 - Hypothetical Protein, at 27856 to 28790 14484

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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25,495 + 14482 mRNA_6114 0.31 -0.5
25,675 + 14482 mRNA_6114 0.52 1.3
25,801 - 14482 mRNA_6114 0.66 0.4
26,028 - -1.2
26,111 - -1.9
26,132 - 0.9
26,139 + 0.4
26,438 + -0.7
26,739 + 14483 mRNA_6115 0.28 -1.0
26,741 - 14483 mRNA_6115 0.28 1.8
26,865 + 14483 mRNA_6115 0.41 -0.7
26,871 - 14483 mRNA_6115 0.41 -0.3
26,872 + 14483 mRNA_6115 0.41 -0.1
26,877 - 14483 mRNA_6115 0.42 -0.4
26,898 + 14483 mRNA_6115 0.44 -0.8
26,996 - 14483 mRNA_6115 0.54 -0.1
27,001 - 14483 mRNA_6115 0.54 0.0
27,004 - 14483 mRNA_6115 0.55 -2.7
27,009 - 14483 mRNA_6115 0.55 1.2
27,058 - 14483 mRNA_6115 0.60 -0.7
27,134 - 14483 mRNA_6115 0.68 0.7
27,139 - 14483 mRNA_6115 0.68 -0.4
27,163 - 14483 mRNA_6115 0.71 1.2
27,219 + 14483 mRNA_6115 0.76 0.6
27,341 - 14483 mRNA_6115 0.88 -0.2
27,346 + 14483 mRNA_6115 0.89 -0.1
27,377 + 1.0
27,381 + -1.2
27,511 + -0.3
27,735 - 0.7
27,934 - -0.1
28,046 - 14484 mRNA_6116 0.20 1.3
28,058 - 14484 mRNA_6116 0.22 0.7
28,064 + 14484 mRNA_6116 0.22 0.3
28,217 + 14484 mRNA_6116 0.39 0.2
28,231 + 14484 mRNA_6116 0.40 0.4
28,250 + 14484 mRNA_6116 0.42 -1.4