Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6114

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6113: 14481 - K17263 CAND1 cullin-associated NEDD8-dissociated protein 1, at 19972 to 24805 14481 mRNA_6114: 14482 - Hypothetical Protein, at 25220 to 26095 14482 mRNA_6115: 14483 - Hypothetical Protein, at 26459 to 27455 14483

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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24,221 - 14481 mRNA_6113 0.88 0.2
24,280 + 14481 mRNA_6113 0.89 -0.5
24,283 - 14481 mRNA_6113 0.89 0.7
24,327 + 0.2
24,337 - -0.0
24,337 - -0.5
24,344 + -2.1
24,392 - -0.0
24,441 + 0.1
24,495 - 2.7
24,552 - -0.1
24,555 + 1.5
24,639 + 2.6
24,665 - 0.9
24,666 - 0.4
24,805 + 0.8
25,098 + 0.9
25,124 - -0.4
25,227 + -1.9
25,495 + 14482 mRNA_6114 0.31 -0.5
25,675 + 14482 mRNA_6114 0.52 1.3
25,801 - 14482 mRNA_6114 0.66 0.4
26,028 - -1.2
26,111 - -1.9
26,132 - 0.9
26,139 + 0.4
26,438 + -0.7
26,739 + 14483 mRNA_6115 0.28 -1.0
26,741 - 14483 mRNA_6115 0.28 1.8
26,865 + 14483 mRNA_6115 0.41 -0.7
26,871 - 14483 mRNA_6115 0.41 -0.3
26,872 + 14483 mRNA_6115 0.41 -0.1
26,877 - 14483 mRNA_6115 0.42 -0.4
26,898 + 14483 mRNA_6115 0.44 -0.8
26,996 - 14483 mRNA_6115 0.54 -0.1
27,001 - 14483 mRNA_6115 0.54 0.0
27,004 - 14483 mRNA_6115 0.55 -2.7
27,009 - 14483 mRNA_6115 0.55 1.2
27,058 - 14483 mRNA_6115 0.60 -0.7