Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6110

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6109: 14477 - KOG1477 SPRY domain-containing proteins, at 12198 to 14626 14477 mRNA_6110: 14478 - Hypothetical Protein, at 15067 to 15769 14478 mRNA_6111: 14479 - Hypothetical Protein, at 16061 to 17629 14479

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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14,377 + 14477 mRNA_6109 0.90 0.0
14,420 + 0.4
14,518 - 0.4
14,520 + 0.4
14,652 + -0.7
14,654 - 0.2
14,676 + 0.4
14,687 + -0.1
14,782 - 1.5
14,806 - 1.5
14,921 + 1.2
14,942 - 0.1
14,949 + -1.8
14,979 - 1.1
14,986 - 0.1
15,116 - 1.9
15,117 + -1.0
15,118 + -1.7
15,130 + 1.4
15,245 - 14478 mRNA_6110 0.25 -0.8
15,256 + 14478 mRNA_6110 0.27 -0.3
15,281 - 14478 mRNA_6110 0.30 0.2
15,308 + 14478 mRNA_6110 0.34 0.1
15,311 + 14478 mRNA_6110 0.35 0.2
15,544 - 14478 mRNA_6110 0.68 -0.3
15,693 - 14478 mRNA_6110 0.89 -0.5
15,705 + 1.8
15,765 - 2.1
15,862 + 0.5
16,319 + 14479 mRNA_6111 0.16 -0.2
16,533 + 14479 mRNA_6111 0.30 1.5
16,535 - 14479 mRNA_6111 0.30 -0.4
16,665 + 14479 mRNA_6111 0.38 -1.6
16,681 + 14479 mRNA_6111 0.40 1.4
16,681 + 14479 mRNA_6111 0.40 -1.0
16,689 + 14479 mRNA_6111 0.40 1.0
16,719 + 14479 mRNA_6111 0.42 0.9