Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6056

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6055: 14423 - Hypothetical Protein, at 1531470 to 1536936 14423 mRNA_6056: 14424 - K13996 EPS1 protein disulfide-isomerase, at 1537539 to 1540392 14424 mRNA_6057: 14425 - Hypothetical Protein, at 1540380 to 1540856 14425 mRNA_6058: 14426 - SUPERFAMILY--SSF52047, at 1541089 to 1542626 14426

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,536,993 + -0.0
1,537,004 - -0.7
1,537,115 + 0.1
1,537,129 - 1.3
1,537,180 + -0.7
1,537,180 + 0.4
1,537,180 + -0.7
1,537,226 + -1.1
1,537,257 - 1.0
1,537,296 - -0.2
1,537,332 - -0.9
1,537,430 + -0.2
1,537,448 + 1.7
1,537,449 - -0.3
1,537,451 - -1.8
1,537,610 + 2.5
1,537,613 - -0.7
1,537,705 - -0.4
1,537,705 - -1.3
1,537,728 - 1.0
1,537,846 + 14424 mRNA_6056 0.11 -0.2
1,537,874 - 14424 mRNA_6056 0.12 0.1
1,538,010 + 14424 mRNA_6056 0.17 1.5
1,538,333 - 14424 mRNA_6056 0.28 1.0
1,538,609 + 14424 mRNA_6056 0.37 2.2
1,539,052 + 14424 mRNA_6056 0.53 -0.5
1,539,160 - 14424 mRNA_6056 0.57 -0.4
1,539,336 - 14424 mRNA_6056 0.63 0.7
1,539,339 + 14424 mRNA_6056 0.63 -0.6
1,539,368 + 14424 mRNA_6056 0.64 -0.1
1,539,509 + 14424 mRNA_6056 0.69 -0.0
1,539,796 + 14424 mRNA_6056 0.79 0.4
1,539,854 - 14424 mRNA_6056 0.81 -1.0
1,539,894 - 14424 mRNA_6056 0.83 0.7
1,539,895 - 14424 mRNA_6056 0.83 0.5
1,539,921 + 14424 mRNA_6056 0.83 -0.1
1,540,043 - 14424 mRNA_6056 0.88 1.6
1,540,143 - -1.0
1,540,186 - 0.4
1,540,191 + -0.1
1,540,301 - 2.5
1,540,353 - 0.3
1,540,481 - 14425 mRNA_6057 0.21 -1.4
1,540,610 + 14425 mRNA_6057 0.48 0.0
1,540,617 + 14425 mRNA_6057 0.50 -1.1
1,540,618 + 14425 mRNA_6057 0.50 -0.3
1,540,639 + 14425 mRNA_6057 0.54 1.9
1,540,765 - 14425 mRNA_6057 0.81 -1.0
1,540,963 - 1.8
1,541,105 + -1.2
1,541,113 - 0.1
1,541,190 + 1.4
1,541,371 - 14426 mRNA_6058 0.18 -0.1