Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6047

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6046: 14414 - Hypothetical Protein, at 1513700 to 1515000 14414 mRNA_6047: 14415 - K17268 COPE coatomer subunit epsilon, at 1515323 to 1516944 14415 mRNA_6048: 14416 - Interpro WSTF, HB1, Itc1p, MBD9 motif 1, at 1517232 to 1519356 14416

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,514,380 + 14414 mRNA_6046 0.52 -0.6
1,514,384 + 14414 mRNA_6046 0.53 -0.4
1,514,384 - 14414 mRNA_6046 0.53 0.5
1,514,537 + 14414 mRNA_6046 0.64 0.8
1,514,798 - 14414 mRNA_6046 0.84 1.4
1,514,800 - 14414 mRNA_6046 0.85 -1.4
1,514,803 - 14414 mRNA_6046 0.85 1.0
1,514,822 + 14414 mRNA_6046 0.86 1.0
1,514,926 - -0.9
1,515,235 + -1.3
1,515,393 - -0.9
1,515,874 + 14415 mRNA_6047 0.34 -0.4
1,516,432 + 14415 mRNA_6047 0.68 -0.2
1,516,851 + 1.0
1,517,156 - -1.1
1,517,157 - 0.9
1,517,164 - 0.5
1,517,306 + 0.2
1,517,362 + -0.3
1,517,431 + -0.7
1,517,472 - 14416 mRNA_6048 0.11 -1.2
1,517,474 + 14416 mRNA_6048 0.11 1.1
1,517,585 - 14416 mRNA_6048 0.17 -0.8
1,517,598 + 14416 mRNA_6048 0.17 0.9
1,517,627 + 14416 mRNA_6048 0.19 0.7
1,517,627 - 14416 mRNA_6048 0.19 0.4
1,517,627 + 14416 mRNA_6048 0.19 -1.3
1,517,631 + 14416 mRNA_6048 0.19 0.2
1,517,647 - 14416 mRNA_6048 0.20 2.3
1,517,654 + 14416 mRNA_6048 0.20 -1.5