Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6032

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6031: 14399 - KOG2890 Predicted membrane protein, at 1484173 to 1485684 14399 mRNA_6032: 14400 - Hypothetical Protein, at 1486205 to 1487772 14400 mRNA_6033: 14401 - Hypothetical Protein, at 1488595 to 1490149 14401

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,485,592 - 0.6
1,485,709 + 0.1
1,485,818 + -0.6
1,485,822 + -0.9
1,485,850 - -1.2
1,485,979 - 0.3
1,485,987 - -1.1
1,486,004 + -1.7
1,486,138 - 0.0
1,486,239 + 0.7
1,486,331 - 0.4
1,486,332 + 0.1
1,486,422 + 14400 mRNA_6032 0.14 -0.9
1,486,425 + 14400 mRNA_6032 0.14 -0.2
1,486,464 + 14400 mRNA_6032 0.17 -1.3
1,486,477 - 14400 mRNA_6032 0.17 -0.3
1,486,480 - 14400 mRNA_6032 0.18 2.6
1,486,541 + 14400 mRNA_6032 0.21 -1.8
1,486,596 - 14400 mRNA_6032 0.25 0.1
1,486,730 - 14400 mRNA_6032 0.33 -0.7
1,486,736 - 14400 mRNA_6032 0.34 0.6
1,486,853 - 14400 mRNA_6032 0.41 -0.8
1,486,883 + 14400 mRNA_6032 0.43 0.7
1,486,956 + 14400 mRNA_6032 0.48 -3.7
1,487,081 + 14400 mRNA_6032 0.56 0.6
1,487,098 - 14400 mRNA_6032 0.57 -1.1
1,487,164 + 14400 mRNA_6032 0.61 -0.2
1,487,211 + 14400 mRNA_6032 0.64 0.8
1,487,318 + 14400 mRNA_6032 0.71 0.3
1,487,322 + 14400 mRNA_6032 0.71 1.1
1,487,340 - 14400 mRNA_6032 0.72 -0.7
1,487,351 - 14400 mRNA_6032 0.73 -2.5
1,487,357 + 14400 mRNA_6032 0.73 -2.0
1,487,592 - 14400 mRNA_6032 0.88 -1.2
1,487,595 + 14400 mRNA_6032 0.89 1.4
1,487,630 - 0.2
1,487,642 + -0.2
1,487,684 + 0.2
1,487,766 - 0.5
1,487,780 - -0.1
1,487,797 + -0.1
1,487,797 + -1.3
1,487,806 - 0.2
1,488,123 - -0.1
1,488,197 + -2.0
1,488,201 - 0.1
1,488,218 + 1.8
1,488,378 - 1.1
1,488,385 - -1.0
1,488,391 + 2.4
1,488,393 + -0.5
1,488,396 + -0.3
1,488,519 + 0.5
1,488,519 + 0.0
1,488,686 + 0.6
1,488,740 - 0.9